Richard Gowers richardjgowers

## extract_block_diagonals
import numpy as np

def blocks_of(a, n, m):
    """Extract a view of (n, m) blocks along the diagonal.

    Arguments:
      a - starting array
      n, m - size of each miniblock

    Returns:

## read_xvg
import numpy as np
import sys

def read_xvg(fname):
    """Read columns of data from file fname

    Returns numpy array of data
    """
    with open(fname, 'r') as f:
        for i, line in enumerate(f):

## layerattr.ipynb

      
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## barycenters.ipynb

      
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## PDB_multiple.ipynb

      
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              March 27, 2017 17:24
            
              
                Multiply out a single PDB file using MDAnalysis (similar to editconf in Gromacs)
              
          
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## cellgrid.ipynb

      
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                / cellgrid.ipynb
            
            
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              May 29, 2018 22:59
            
              
                Optimising cellgrids
              
          
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## uniq.ipynb

      
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              Created
              June 24, 2018 20:21
            
              
                Unique v2
              
          
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## implicit_all.ipynb

      
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              Created
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                For scipy issue 3168
              
          
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## timing-2.ipynb

      
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              November 17, 2018 13:46
            
              
                Timing distance searching in MDAnalysis and BioPython
              
          
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## timing-2.ipynb

      
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                richardjgowers
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              November 17, 2018 13:46
            
              
                Timing distance searching in MDAnalysis and BioPython
              
          
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	import numpy as np

	def blocks_of(a, n, m):
	"""Extract a view of (n, m) blocks along the diagonal.

	Arguments:
	a - starting array
	n, m - size of each miniblock

	Returns:
	import numpy as np
	import sys

	def read_xvg(fname):
	"""Read columns of data from file fname

	Returns numpy array of data
	"""
	with open(fname, 'r') as f:
	for i, line in enumerate(f):