Salvatore Loguercio salvatoreloguercio

## dbgapr_R_3.6.2.info
# pull R 3.6.2 with devtools (docker image), convert it to singularity image (sif).
singularity pull docker://camaralab/rstudio_dev:3.6.2

# run R within the sif image
singularity run rstudio_dev_3.6.2.sif R

# in R, load the required dependencies for dbgapr-dev
install.packages("https://cran.r-project.org/src/contrib/Archive/tidyselect/tidyselect_1.0.0.tar.gz")
install.packages("https://cran.r-project.org/src/contrib/plogr_0.2.0.tar.gz")
install.packages("https://cran.r-project.org/src/contrib/Archive/dplyr/dplyr_0.8.4.tar.gz")

## MESA_10_all.tsv

      
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                salvatoreloguercio
                / MESA_10_all.tsv
            
            
              Last active
              November 22, 2023 01:30
            
              
                Input embeddings for Tensorflow projector
              
          
      We can't make this file beautiful and searchable because it's too large.
    

## VSP_emb_548g.tsv
0.53125	0.031677246	0.010429382	0.238891602	0.128540039	0.781738281	0.137207031	0.089050293	0.029968262	0.458496094	0.015945435	1.92578125	0.028106689	0.057220459	0	0.491210938	0.83984375	1.547851563	0.020584106	0.091491699	1.009765625	0.374755859	0.407714844	0.924316406	0.029830933	0.19909668	0.349121094	0.384033203	0.321044922	0.358642578	0.001268387	0.407714844	0.043457031	0.247192383	2.14453125	0.170043945	0.224365234	0.000308275	0.058746338	0.125732422	0.333251953	0.719726563	0.170654297	1.556640625	0.412841797	0.012718201	0.215942383	0.627929688	0.889648438	0.559570313	0.772949219	0.753417969	0.015296936	0.000505447	0.053771973	0.252197266	1.09765625	0.5703125	0.101257324	0.126342773	0.048950195	0.002141953	0.015205383	0.104125977	0.246704102	0.017547607	1.80859375	0.018493652	0.505371094	0.194702148	0.088195801	0	0.071716309	0.334716797	0.141235352	0.020706177	0.125	0.380615234	0.002510071	0.428222656	0.009506226	0.038909912	0.056640625	1.485351563	0.382324219	0.026031494	0.036254883	0.444091797	0.7255
	# pull R 3.6.2 with devtools (docker image), convert it to singularity image (sif).
	singularity pull docker://camaralab/rstudio_dev:3.6.2

	# run R within the sif image
	singularity run rstudio_dev_3.6.2.sif R

	# in R, load the required dependencies for dbgapr-dev
	install.packages("https://cran.r-project.org/src/contrib/Archive/tidyselect/tidyselect_1.0.0.tar.gz")
	install.packages("https://cran.r-project.org/src/contrib/plogr_0.2.0.tar.gz")
	install.packages("https://cran.r-project.org/src/contrib/Archive/dplyr/dplyr_0.8.4.tar.gz")