description.md

gistfile1.txt

This log output shows Chris running `python run.py` on Windows. It shows two issues. 

1. A syntax error in jupyterlab
2. A config error (presumably due to deprecated config) for jupyterlab 

```txt
(base) C:\Users\cwood\Documents\GitHub\rich_test_1>python run.py
Building docker image. This may take some time (particularly on the first run)...
#0 building with "default" instance using docker driver
#1 [internal] load build definition from Dockerfile
#1 transferring dockerfile: 1.09kB done
#1 DONE 0.0s
#2 [internal] load metadata for docker.io/ebmdatalab/datalab-jupyter:python3.8.1-2328e31e7391a127fe7184dcce38d581a17b1fa5
#2 DONE 0.9s
#3 [internal] load .dockerignore
#3 transferring context: 2B done
#3 DONE 0.0s
#4 [1/7] FROM docker.io/ebmdatalab/datalab-jupyter:python3.8.1-2328e31e7391a127fe7184dcce38d581a17b1fa5@sha256:3341a83e925e75d157d964fe2936a73510d808f0f7e9fc2b34f6dc6305d9034d
#4 DONE 0.0s
#5 [internal] load build context
#5 transferring context: 8.01kB 0.0s done
#5 DONE 0.0s
#6 [6/7] RUN jupyter kernelspec install /tmp/kernel_with_custom_path/ --user --name="python3"
#6 CACHED
#7 [5/7] COPY config/kernel.json /tmp/kernel_with_custom_path/kernel.json
#7 CACHED
#8 [2/7] COPY requirements.txt /tmp/
#8 CACHED
#9 [3/7] RUN chmod 644 /tmp/requirements.txt
#9 CACHED
#10 [4/7] RUN pip install --requirement /tmp/requirements.txt
#10 CACHED
#11 [7/7] COPY bq-service-account.jso[n] /tmp/
#11 CACHED
#12 exporting to image
#12 exporting layers done
#12 writing image sha256:f8dd36fb8cc0da778c73e45b470306128be4c7222b0626c0c4e055150d3bdcad done
#12 naming to docker.io/library/datalab-notebook done
#12 DONE 0.0s

View build details: docker-desktop://dashboard/build/default/default/d9m28b6cbm4fh7pwunnjlirdz

What's Next?
  View a summary of image vulnerabilities and recommendations → docker scout quickview
Running docker...
To stop this docker container, use Ctrl+ C, or the File -> Shut Down menu in Jupyter Lab
Fail to get yarn configuration. /root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/jupyterlab/staging/yarn.js:4
(()=>{var Qge=Object.create;var AS=Object.defineProperty;var bge=Object.getOwnPropertyDescriptor;var Sge=Object.getOwnPropertyNames;var vge=Object.getPrototypeOf,xge=Object.prototype.hasOwnProperty;var J=(r=>typeof require<"u"?require:typeof Proxy<"u"?new Proxy(r,{get:(e,t)=>(typeof require<"u"?require:e)[t]}):r)(function(r){if(typeof require<"u")return require.apply(this,arguments);throw new Error('Dynamic require of "'+r+'" is not supported')});var Pge=(r,e)=>()=>(r&&(e=r(r=0)),e);var w=(r,e)=>()=>(e||r((e={exports:{}}).exports,e),e.exports),ut=(r,e)=>{for(var t in e)AS(r,t,{get:e[t],enumerable:!0})},Dge=(r,e,t,i)=>{if(e&&typeof e=="object"||typeof e=="function")for(let n of Sge(e))!xge.call(r,n)&&n!==t&&AS(r,n,{get:()=>e[n],enumerable:!(i=bge(e,n))||i.enumerable});return r};var Pe=(r,e,t)=>(t=r!=null?Qge(vge(r)):{},Dge(e||!r||!r.__esModule?AS(t,"default",{value:r,enumerable:!0}):t,r));var QK=w((GXe,BK)=>{BK.exports=wK;wK

SyntaxError: Unexpected token {
    at createScript (vm.js:80:10)
    at Object.runInThisContext (vm.js:139:10)
    at Module._compile (module.js:616:28)
    at Object.Module._extensions..js (module.js:663:10)
    at Module.load (module.js:565:32)
    at tryModuleLoad (module.js:505:12)
    at Function.Module._load (module.js:497:3)
    at Function.Module.runMain (module.js:693:10)
    at startup (bootstrap_node.js:188:16)
    at bootstrap_node.js:609:3

[I 2024-03-11 12:23:32.511 ServerApp] jupyter_lsp | extension was successfully linked.
[I 2024-03-11 12:23:32.515 ServerApp] jupyter_server_terminals | extension was successfully linked.
[W 2024-03-11 12:23:32.518 LabApp] 'allow_root' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
[W 2024-03-11 12:23:32.518 LabApp] 'contents_manager_class' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
[W 2024-03-11 12:23:32.518 LabApp] 'allow_remote_access' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
[W 2024-03-11 12:23:32.518 LabApp] 'ip' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
[W 2024-03-11 12:23:32.518 LabApp] 'ip' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
[W 2024-03-11 12:23:32.518 LabApp] 'ip' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
[W 2024-03-11 12:23:32.518 LabApp] 'token' has moved from NotebookApp to ServerApp. This config will be passed to ServerApp. Be sure to update your config before our next release.
[W 2024-03-11 12:23:32.522 ServerApp] jupyterlab | error linking extension: The 'contents_manager_class' trait of a ServerApp instance expected a subclass of 'jupyter_server.services.contents.manager.ContentsManager', not the JupytextContentsManager JupytextContentsManager.
    Traceback (most recent call last):
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/jupyter_server/extension/manager.py", line 345, in link_extension
        extension.link_all_points(self.serverapp)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/jupyter_server/extension/manager.py", line 227, in link_all_points
        self.link_point(point_name, serverapp)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/jupyter_server/extension/manager.py", line 217, in link_point
        point.link(serverapp)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/jupyter_server/extension/manager.py", line 139, in link
        linker(serverapp)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/jupyter_server/extension/application.py", line 411, in _link_jupyter_server_extension
        self.serverapp.update_config(self.config)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/traitlets/config/configurable.py", line 244, in update_config
        self._load_config(config)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/traitlets/config/configurable.py", line 193, in _load_config
        setattr(self, name, deepcopy(config_value))
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/traitlets/traitlets.py", line 716, in __set__
        self.set(obj, value)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/traitlets/traitlets.py", line 690, in set
        new_value = self._validate(obj, value)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/traitlets/traitlets.py", line 722, in _validate
        value = self.validate(obj, value)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/traitlets/traitlets.py", line 2151, in validate
        self.error(obj, value)
      File "/root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/traitlets/traitlets.py", line 831, in error
        raise TraitError(e)
    traitlets.traitlets.TraitError: The 'contents_manager_class' trait of a ServerApp instance expected a subclass of 'jupyter_server.services.contents.manager.ContentsManager', not the JupytextContentsManager JupytextContentsManager.
[I 2024-03-11 12:23:32.523 ServerApp] jupytext | extension was successfully linked.
[I 2024-03-11 12:23:32.525 ServerApp] Writing Jupyter server cookie secret to /root/.local/share/jupyter/runtime/jupyter_cookie_secret
[I 2024-03-11 12:23:32.698 ServerApp] notebook_shim | extension was successfully linked.
[W 2024-03-11 12:23:32.700 ServerApp] Config option `preferred_jupytext_formats_save` not recognized by `AsyncLargeFileManager`.
[W 2024-03-11 12:23:32.701 ServerApp] Config option `default_jupytext_formats` not recognized by `AsyncLargeFileManager`.
[W 2024-03-11 12:23:32.701 ServerApp] Config option `default_notebook_metadata_filter` not recognized by `AsyncLargeFileManager`.
[W 2024-03-11 12:23:32.702 ServerApp] Config option `default_cell_metadata_filter` not recognized by `AsyncLargeFileManager`.
[I 2024-03-11 12:23:32.751 ServerApp] notebook_shim | extension was successfully loaded.
[I 2024-03-11 12:23:32.757 ServerApp] jupyter_lsp | extension was successfully loaded.
[I 2024-03-11 12:23:32.758 ServerApp] jupyter_server_terminals | extension was successfully loaded.
[I 2024-03-11 12:23:32.760 LabApp] JupyterLab extension loaded from /root/.pyenv/versions/3.8.1/lib/python3.8/site-packages/jupyterlab
[I 2024-03-11 12:23:32.760 LabApp] JupyterLab application directory is /root/.pyenv/versions/3.8.1/share/jupyter/lab
[I 2024-03-11 12:23:32.760 LabApp] Extension Manager is 'pypi'.
[I 2024-03-11 12:23:32.769 ServerApp] jupyterlab | extension was successfully loaded.
[I 2024-03-11 12:23:32.769 ServerApp] [Jupytext Server Extension] Deriving a JupytextContentsManager from AsyncLargeFileManager
[I 2024-03-11 12:23:32.770 ServerApp] jupytext | extension was successfully loaded.
[C 2024-03-11 12:23:32.771 ServerApp] Running as root is not recommended. Use --allow-root to bypass.
```