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mpiexec -n 3 ./example_controller -threads-per-node 9 ~/dropbox/*.fastq | |
is king | |
actor 1020038268 spawned controller 855878001 | |
actor 1020038268 synchronizes | |
actor 1020038268 receives BSAL_ACTOR_SYNCHRONIZE | |
actor 1770361225 receives BSAL_ACTOR_SYNCHRONIZE | |
actor 381171080 receives BSAL_ACTOR_SYNCHRONIZE | |
actor 1020038268 receives BSAL_ACTOR_SYNCHRONIZED, sending BSAL_ACTOR_YIELD | |
actor 1020038268, starting controller 855878001 | |
actor 1020038268 is king |
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mpiexec -n 3 ./example_controller -threads-per-node 9 ~/dropbox/*.fastq | |
is king | |
actor 1582086009 spawned controller 571222134 | |
actor 1582086009 synchronizes | |
actor 1249840463 receives BSAL_ACTOR_SYNCHRONIZE | |
actor 1582086009 receives BSAL_ACTOR_SYNCHRONIZE | |
actor 1201373482 receives BSAL_ACTOR_SYNCHRONIZE | |
actor 1582086009 receives BSAL_ACTOR_SYNCHRONIZED, sending BSAL_ACTOR_YIELD | |
actor 1582086009, starting controller 571222134 | |
actor 1582086009 is king |
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Progress so far on project Core | |
[seb@sal biosal]# ./scripts/lines.sh | |
5742 total | |
705 ./engine/actor.c | |
681 ./engine/node.c | |
313 ./engine/worker.c | |
308 ./structures/hash_table.c | |
200 ./examples/mock/mock.c | |
197 ./examples/ring/sender.c |
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cd /kb | |
git clone ssh://kbase@git.kbase.us/dev_container | |
cd /kb/dev_container | |
./bootstrap /kb/runtime | |
source user-env.sh | |
cd /kb/dev_container/modules | |
git clone ssh://kbase@git.kbase.us/assembly | |
git fetch origin | |
git checkout RC | |
make deploy |
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ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQCxAD9LtPuPiSpsurw/ahxZd4HcDH0cFuVJ0p5PD6FhCyvsRVdqQVSn/DE6BVbhIHhH84rCsNzZ1ZXOUcqrO4soXjWQDRfJYwBKHzdIfnMPvQRMU7CsFHGP5gaZwsYJqK3+bTKGwuWC6Q/XgcBze/IgtYJu/nja/eO+jtAdFlG53hIqvEHpCFO6VqV8jPoP8cMGjZWyHAhzTSrIAkdm66lOyTm01+5oLQvGtez1raFL4HrZwokx7E5vuBlfHq5croEjhp2nHDIsxHOGrBntysN3uewscfoTkMFzK+uXkd6KDmNqggCQxZx1F8d0KG7ad6o34XpsQfhjuUAJic88M8vl seb@fault |
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diff --git a/code/SeedingData/PathHandle.cpp b/code/SeedingData/PathHandle.cpp | |
index 5398a55..e037a83 100644 | |
--- a/code/SeedingData/PathHandle.cpp | |
+++ b/code/SeedingData/PathHandle.cpp | |
@@ -20,7 +20,12 @@ | |
#include "PathHandle.h" | |
+#include <fstream> | |
+#include <iostream> |
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diff --git a/code/SeedingData/PathHandle.cpp b/code/SeedingData/PathHandle.cpp | |
index 5398a55..e037a83 100644 | |
--- a/code/SeedingData/PathHandle.cpp | |
+++ b/code/SeedingData/PathHandle.cpp | |
@@ -20,7 +20,12 @@ | |
#include "PathHandle.h" | |
+#include <fstream> | |
+#include <iostream> |
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#include <iostream> | |
#include <fstream> | |
#include <stdint.h> | |
using namespace std; | |
class Test { | |
private: | |
uint64_t m_value; | |
public: | |
Test(); |
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#include <iostream> | |
#include <fstream> | |
#include <stdint.h> | |
using namespace std; | |
class Test { | |
private: | |
uint64_t m_value; | |
public: | |
Test(); |
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Latency Comparison Numbers | |
-------------------------- | |
L1 cache reference 0.5 ns | |
Branch mispredict 5 ns | |
L2 cache reference 7 ns 14x L1 cache | |
Mutex lock/unlock 25 ns | |
Main memory reference 100 ns 20x L2 cache, 200x L1 cache | |
Compress 1K bytes with Zippy 3,000 ns | |
Send 1K bytes over 1 Gbps network 10,000 ns 0.01 ms | |
Read 4K randomly from SSD* 150,000 ns 0.15 ms |