Matt McCormick thewtex

## itkwidgets-htj2k-demo.ipynb

      
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                thewtex
                / itkwidgets-htj2k-demo.ipynb
            
            
              Created
              October 19, 2023 16:17
            
              
                htj2k python wasm example
              
          
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## hypha-client.ipynb

      
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                thewtex
                / hypha-client.ipynb
            
            
              Last active
              June 9, 2023 16:05
            
              
                AI4Life 2023 hackathon hypha remote render
              
          
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## itk-dask-blogpost.ipynb

      
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                thewtex
                / itk-dask-blogpost.ipynb
            
            
              Created
              March 3, 2023 12:43
                — forked from GenevieveBuckley/itk-dask-blogpost.ipynb
            
              
                ITK + Dask notebooks (August 2022)
              
          
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## ViewerChannelTestingData.ipynb

      
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                thewtex
                / ViewerChannelTestingData.ipynb
            
            
              Last active
              May 11, 2022 14:23
            
          
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## I46_tiles_ngff_datatree.ipynb

      
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                thewtex
                / I46_tiles_ngff_datatree.ipynb
            
            
              Created
              April 21, 2022 21:23
            
          
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## save_image_from_numpy_array_affine_matrix.py
import itk
import numpy as np

def save(np_array: np.ndarray, filename: str, affine_matrix: np.ndarray):
    # -1 for translation
    Dimension = affine_matrix.shape[0] - 1
    # Is this a multi-component image?
    is_vector = np_array.ndim != Dimension
    print('is_vector', is_vector)

## ImageChannelInterleavedContiguous.ipynb

      
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                thewtex
                / ImageChannelInterleavedContiguous.ipynb
            
            
              Last active
              October 27, 2020 15:07
            
              
                Demonstrate image channel interleaved vs contiguous in ITK / PIL / Matplotlib versus PyTorch
              
          
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## Segmentation_Image_Distance.ipynb

      
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                thewtex
                / Segmentation_Image_Distance.ipynb
            
            
              Created
              August 10, 2020 17:05
            
              
                Segmentation image distance
              
          
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## AnisotropicSpacing.ipynb

      
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                thewtex
                / AnisotropicSpacing.ipynb
            
            
              Created
              June 21, 2020 03:56
            
              
                 X/Y/Z anisotropic voxel scaling possible with the itkwidgets.view function?
              
          
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## ContourExtractor2D.ipynb

      
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                thewtex
                / ContourExtractor2D.ipynb
            
            
              Created
              June 10, 2020 02:28
            
              
                itk.ContourExtractor2DImageFilter example
              
          
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	import itk
	import numpy as np

	def save(np_array: np.ndarray, filename: str, affine_matrix: np.ndarray):
	# -1 for translation
	Dimension = affine_matrix.shape[0] - 1
	# Is this a multi-component image?
	is_vector = np_array.ndim != Dimension
	print('is_vector', is_vector)