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@thewtex
thewtex / ITKCommitPrefixChangelog.py
Created May 15, 2020 21:48
Generate a Markdown changelog from commits between recent tags that use the ITK commit prefixes
#!/usr/bin/env python3
import subprocess
import sys
if len(sys.argv) < 2:
print('Usage: ' + sys.argv[0] + ' <ReleaseNotesFilePath.md>')
sys.exit(1)
output_file = sys.argv[1]
@thewtex
thewtex / build-test-package.yml
Last active June 16, 2020 12:22
ITK remote module GitHub Actions configuration
name: Build, test, package
on: [push,pull_request]
jobs:
build-test-cxx:
runs-on: ${{ matrix.os }}
strategy:
max-parallel: 3
matrix:
@thewtex
thewtex / netlify-zarr-config.py
Created March 6, 2020 14:41
Prepare a Zarr Directory Store for deployment on a Netlify Site
#!/usr/bin/env python3
"""Netlify does not serve hidden files, i.e files starting with a '.'. Copy Zarr
hidden files and generate a '_redirects' file for Zarr DirectoryStore
deployment.
References:
- https://docs.netlify.com/routing/redirects/#syntax-for-the-redirects-file
- https://community.netlify.com/t/hidden-files-removed-in-zip-deploy/8997
@thewtex
thewtex / SCIFIO-itk-vtk-viewer.imjoy.html
Created January 29, 2020 22:54
SCIFIO-itk-vtk-viewer.imjoy.html
<docs>
# SCIFIO.js transpiled with Java2Script
Source code: https://github.com/BobHanson/scifio-SwingJS
Distribution: https://github.com/oeway/static/tree/master/j2s
This library was made during the Dresden Hackathon in Dec. 2019.
People who participant into this project: Bob Hanson, Curtis Rueden, Wei Ouyang and Florian Jug
@thewtex
thewtex / OpenCLGPUImageProcessing.ipynb
Created December 12, 2019 12:32
OpenCL GPU Image Processing CSBD Hackathon
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@thewtex
thewtex / RichardsonLucyDeconvolution.ipynb
Last active August 2, 2019 18:51
Light sheet Richardson-Lucy deconvolution
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@thewtex
thewtex / NWB:N Behavior OPhys.ipynb
Last active May 16, 2019 19:36
Example Jupyter Visualization of Allen Brain Institute Behavior OPhys NWB:N File
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@thewtex
thewtex / PhaseSymmetryUltrasound.ipynb
Created January 25, 2019 16:57
itk-phasesymmetry on 3D ultrasoun
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@thewtex
thewtex / ITK_Wiki_Release_Notes_to_Markdown.ipynb
Created December 19, 2018 16:20
ITK Median Wiki Release Notes to Markdown
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@thewtex
thewtex / ITKDaskSkimageLocalMeanResizeComparison.ipynb
Created October 29, 2018 04:51
ITKDaskSkimageLocalMeanResizeComparison.ipynb
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