Created
June 28, 2021 08:48
-
-
Save thomasaarholt/6e072df8fd5164a6bfaac19774ddbeaf to your computer and use it in GitHub Desktop.
KDEpy error
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
(gpus) [thomasaar@ml2 KDEpy]$ pip install -e . | |
Obtaining file:///itf-fi-ml/home/thomasaar/github/KDEpy | |
Requirement already satisfied: numpy>=1.14.2 in /itf-fi-ml/home/thomasaar/.conda/envs/gpus/lib/python3.9/site-packages (from KDEpy==1.1.0) (1.21.0) | |
Requirement already satisfied: scipy>=1.0.1 in /itf-fi-ml/home/thomasaar/.conda/envs/gpus/lib/python3.9/site-packages (from KDEpy==1.1.0) (1.6.3) | |
Requirement already satisfied: matplotlib>=2.2.0 in /itf-fi-ml/home/thomasaar/.conda/envs/gpus/lib/python3.9/site-packages (from KDEpy==1.1.0) (3.4.2) | |
Requirement already satisfied: pillow>=6.2.0 in /itf-fi-ml/home/thomasaar/.conda/envs/gpus/lib/python3.9/site-packages (from matplotlib>=2.2.0->KDEpy==1.1.0) (8.2.0) | |
Requirement already satisfied: cycler>=0.10 in /itf-fi-ml/home/thomasaar/.conda/envs/gpus/lib/python3.9/site-packages (from matplotlib>=2.2.0->KDEpy==1.1.0) (0.10.0) | |
Requirement already satisfied: python-dateutil>=2.7 in /itf-fi-ml/home/thomasaar/.conda/envs/gpus/lib/python3.9/site-packages (from matplotlib>=2.2.0->KDEpy==1.1.0) (2.8.1) | |
Requirement already satisfied: pyparsing>=2.2.1 in /itf-fi-ml/home/thomasaar/.conda/envs/gpus/lib/python3.9/site-packages (from matplotlib>=2.2.0->KDEpy==1.1.0) (2.4.7) | |
Requirement already satisfied: kiwisolver>=1.0.1 in /itf-fi-ml/home/thomasaar/.conda/envs/gpus/lib/python3.9/site-packages (from matplotlib>=2.2.0->KDEpy==1.1.0) (1.3.1) | |
Requirement already satisfied: six in /itf-fi-ml/home/thomasaar/.conda/envs/gpus/lib/python3.9/site-packages (from cycler>=0.10->matplotlib>=2.2.0->KDEpy==1.1.0) (1.16.0) | |
Installing collected packages: KDEpy | |
Running setup.py develop for KDEpy | |
ERROR: Command errored out with exit status 1: | |
command: /itf-fi-ml/home/thomasaar/.conda/envs/gpus/bin/python3.9 -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/itf-fi-ml/home/thomasaar/github/KDEpy/setup.py'"'"'; __file__='"'"'/itf-fi-ml/home/thomasaar/github/KDEpy/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' develop --no-deps | |
cwd: /itf-fi-ml/home/thomasaar/github/KDEpy/ | |
Complete output (15 lines): | |
running develop | |
running egg_info | |
writing KDEpy.egg-info/PKG-INFO | |
writing dependency_links to KDEpy.egg-info/dependency_links.txt | |
writing requirements to KDEpy.egg-info/requires.txt | |
writing top-level names to KDEpy.egg-info/top_level.txt | |
reading manifest file 'KDEpy.egg-info/SOURCES.txt' | |
reading manifest template 'MANIFEST.in' | |
warning: no files found matching '*.c' under directory 'KDEpy' | |
writing manifest file 'KDEpy.egg-info/SOURCES.txt' | |
running build_ext | |
building 'cutils' extension | |
gcc -pthread -B /itf-fi-ml/home/thomasaar/.conda/envs/gpus/compiler_compat -Wl,--sysroot=/ -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /itf-fi-ml/home/thomasaar/.conda/envs/gpus/include -fPIC -O2 -isystem /itf-fi-ml/home/thomasaar/.conda/envs/gpus/include -fPIC -I/itf-fi-ml/home/thomasaar/.conda/envs/gpus/include/python3.9 -c KDEpy/cutils.c -o build/temp.linux-x86_64-3.9/KDEpy/cutils.o | |
gcc: error: KDEpy/cutils.c: No such file or directory | |
error: command '/storage/software/GCCcore/10.2.0/bin/gcc' failed with exit code 1 | |
---------------------------------------- | |
ERROR: Command errored out with exit status 1: /itf-fi-ml/home/thomasaar/.conda/envs/gpus/bin/python3.9 -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/itf-fi-ml/home/thomasaar/github/KDEpy/setup.py'"'"'; __file__='"'"'/itf-fi-ml/home/thomasaar/github/KDEpy/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' develop --no-deps Check the logs for full command output. |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment