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September 4, 2017 12:45
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whatR version 3.4.1 (2017-06-30) | |
Platform: x86_64-pc-linux-gnu (64-bit) | |
Running under: Ubuntu precise (12.04.5 LTS) | |
Matrix products: default | |
BLAS: /usr/lib/atlas-base/libf77blas.so.3gf.0 | |
LAPACK: /usr/lib/atlas-base/atlas/liblapack.so.3gf.0 | |
locale: | |
[1] LC_CTYPE=en_GB.UTF-8 LC_NUMERIC=C | |
[3] LC_TIME=en_GB.UTF-8 LC_COLLATE=en_GB.UTF-8 | |
[5] LC_MONETARY=en_GB.UTF-8 LC_MESSAGES=en_GB.UTF-8 | |
[7] LC_PAPER=en_GB.UTF-8 LC_NAME=C | |
[9] LC_ADDRESS=C LC_TELEPHONE=C | |
[11] LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C | |
attached base packages: | |
[1] stats4 parallel stats graphics grDevices utils datasets | |
[8] methods base | |
other attached packages: | |
[1] DESeq_1.29.0 lattice_0.20-35 | |
[3] locfit_1.5-9.1 scater_1.5.11 | |
[5] SingleCellExperiment_0.99.3 SummarizedExperiment_1.7.5 | |
[7] DelayedArray_0.3.19 matrixStats_0.52.2 | |
[9] GenomicRanges_1.29.12 GenomeInfoDb_1.13.4 | |
[11] IRanges_2.11.12 S4Vectors_0.15.6 | |
[13] ggplot2_2.2.1 Biobase_2.37.2 | |
[15] BiocGenerics_0.23.0 BiocInstaller_1.27.3 | |
loaded via a namespace (and not attached): | |
[1] viridis_0.4.0 edgeR_3.19.3 splines_3.4.1 | |
[4] bit64_0.9-7 jsonlite_1.5 viridisLite_0.2.0 | |
[7] shiny_1.0.5 assertthat_0.2.0 blob_1.1.0 | |
[10] vipor_0.4.5 GenomeInfoDbData_0.99.1 progress_1.1.2 | |
[13] RSQLite_2.0 glue_1.1.1 limma_3.33.7 | |
[16] uuid_0.1-2 digest_0.6.12 RColorBrewer_1.1-2 | |
[19] XVector_0.17.1 colorspace_1.3-2 htmltools_0.3.6 | |
[22] httpuv_1.3.5 Matrix_1.2-11 plyr_1.8.4 | |
[25] XML_3.98-1.9 pkgconfig_2.0.1 biomaRt_2.33.4 | |
[28] genefilter_1.59.0 zlibbioc_1.23.0 xtable_1.8-2 | |
[31] scales_0.5.0 annotate_1.55.0 tibble_1.3.4 | |
[34] repr_0.12.0 lazyeval_0.2.0 survival_2.41-3 | |
[37] magrittr_1.5 crayon_1.3.2 mime_0.5 | |
[40] memoise_1.1.0 evaluate_0.10.1 beeswarm_0.2.3 | |
[43] shinydashboard_0.6.1 tools_3.4.1 data.table_1.10.4 | |
[46] prettyunits_1.0.2 stringr_1.2.0 munsell_0.4.3 | |
[49] AnnotationDbi_1.39.2 bindrcpp_0.2 compiler_3.4.1 | |
[52] rlang_0.1.2 rhdf5_2.21.4 grid_3.4.1 | |
[55] RCurl_1.95-4.8 tximport_1.5.0 pbdZMQ_0.2-6 | |
[58] IRkernel_0.8.8.9000 rjson_0.2.15 bitops_1.0-6 | |
[61] gtable_0.2.0 DBI_0.7 reshape2_1.4.2 | |
[64] R6_2.2.2 gridExtra_2.2.1 dplyr_0.7.2 | |
[67] bit_1.1-12 bindr_0.1 stringi_1.1.5 | |
[70] ggbeeswarm_0.6.0 IRdisplay_0.4.4 Rcpp_0.12.12 | |
[73] geneplotter_1.55.0 |
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