Ernest Murray ejmurray

## Get Github Library.py
# Note that this script attempts to delete directories (Folders) called 'temp' and 'dateutil'
# within Pythonista as part of installation. It will also overwrite files in directories
# named 'github' and 'githubista'. If you are using Pythonista 1.3 or above please check
# that you have not created any Folders with these names before running this script as
# any files inside them will be irretrievably lost.
import os
import urllib2
import tarfile
import shutil
import traceback

## gist:5a793416d12342ded7c2
#!/usr/bin/python

import os
import io
import sys
import shutil
import re
import string
from datetime import date, datetime, time

## rdkit_msvc2012.txt
No boost binaries for MSVC 2012 available, so...

Delete all other Python versions other than Python 2.7 (not sure if necessary...)

Unzip Boost 1.49.0 to C:\Boost\boost_1_49_0
cd into it
bootstrap # to create bjam
bjam.exe --with-regex --with-python --with-date_time --with-thread link=shared toolset=msvc-11.0 release install -j4
bjam.exe --with-thread --with-date_time toolset=msvc-11.0 release stage -j4 # Then copy from C:\Boost\boost_1_49_0\stage\lib

## pubmed_search.py
"""Tools for searching Pubmed for a list of PMIDs.

The goal here is to search for many PMIDs at once, since searching
sequentially can take a long time. Using the the BioPython Entrez module
is super convenient to this end.

The results results are returned in a simple dictionary format.
"""


## count_words.py
"""
Use a Counter to find the most common words in "The Wonderful Wizard of Oz" by
L. Frank Baum.

Available in plain text at:
https://ia700500.us.archive.org/2/items/thewonderfulwiza00055gut/wizoz10.txt

short link: http://bit.ly/thewonderfulwizard

Note: This code also counts the words in the header, so it's not a *realistic*

## organize-photos.py
#!/usr/bin/python

import sys
import os, shutil
import subprocess
import os.path
from datetime import datetime

######################## Functions #########################
	# Note that this script attempts to delete directories (Folders) called 'temp' and 'dateutil'
	# within Pythonista as part of installation. It will also overwrite files in directories
	# named 'github' and 'githubista'. If you are using Pythonista 1.3 or above please check
	# that you have not created any Folders with these names before running this script as
	# any files inside them will be irretrievably lost.
	import os
	import urllib2
	import tarfile
	import shutil
	import traceback
	#!/usr/bin/python

	import os
	import io
	import sys
	import shutil
	import re
	import string
	from datetime import date, datetime, time
	No boost binaries for MSVC 2012 available, so...

	Delete all other Python versions other than Python 2.7 (not sure if necessary...)

	Unzip Boost 1.49.0 to C:\Boost\boost_1_49_0
	cd into it
	bootstrap # to create bjam
	bjam.exe --with-regex --with-python --with-date_time --with-thread link=shared toolset=msvc-11.0 release install -j4
	bjam.exe --with-thread --with-date_time toolset=msvc-11.0 release stage -j4 # Then copy from C:\Boost\boost_1_49_0\stage\lib
	"""Tools for searching Pubmed for a list of PMIDs.

	The goal here is to search for many PMIDs at once, since searching
	sequentially can take a long time. Using the the BioPython Entrez module
	is super convenient to this end.

	The results results are returned in a simple dictionary format.
	"""
	"""
	Use a Counter to find the most common words in "The Wonderful Wizard of Oz" by
	L. Frank Baum.

	Available in plain text at:
	https://ia700500.us.archive.org/2/items/thewonderfulwiza00055gut/wizoz10.txt

	short link: http://bit.ly/thewonderfulwizard

	Note: This code also counts the words in the header, so it's not a realistic
	#!/usr/bin/python

	import sys
	import os, shutil
	import subprocess
	import os.path
	from datetime import datetime

	######################## Functions #########################