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Επικοινωνία

• Αλέξανδρος Καντεράκης. kantale@ics.forth.gr

Πρόγραμμα

• Week 1: Εισαγωγή στη python, γιατί python; anaconda installation, περιβάλλον ανάπτυξης jupyter, markdown, social coding, primitive data types and operations, strings, boolean logic, slicing
• Week 2: Lists, tuples, for, while, if_then_else, continue, break. Whitespaces for indentation
• Week 3: List comprehensions
• Week 4: functions, variable scope, map/reduce, functional programming, recursive functions
• Week 5: Dictionaries, complex data types, dictionary comprehensions, sets, set comprehensions
• Week 6: Sorting, Counting, Filtering, lambda functions, generators, generator comprehensions

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hapgen2 2.1.2

Install

wget https://mathgen.stats.ox.ac.uk/genetics_software/hapgen/download/builds/macosx_intel/v2.1.2/hapgen2_macosx_intel.tar.gz
tar zxvf hapgen2_macosx_intel.tar.gz

validate

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This is a list of common mistakes and bad practices seen in assignments submitted for the Bioinformatics lesson.

Note 1

Prefer using with instead of open/close

https://www.pythonforbeginners.com/files/reading-and-writing-files-in-python

One bonus of using this method is that any files opened will be closed automatically after you are done. This leaves less to worry about during cleanup.

Avoid:

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