myedibleenso

import java.io.File

import scala.util.Random
import ai.lum.common.FileUtils._
import ai.lum.common.RandomUtils._
import ai.lum.nxmlreader.NxmlReader

val rand = new Random(42)
val nxmlDir = new File("/net/kate/storage/data/nlp/corpora/bmgf/OA-100K-sample/data/nlp/corpora/pmc_openaccess/pmc_aug2016/")
val nxmlFiles = nxmlDir.listFilesByWildcard("*.nxml", recursive = true)

myedibleenso

Keybase proof

I hereby claim:

• I am myedibleenso on github.
• I am ghp (https://keybase.io/ghp) on keybase.
• I have a public key whose fingerprint is 384E 08B3 A64C F9EB D898 EF72 87D0 46FF EF5F 4EBE

To claim this, I am signing this object:

myedibleenso

myedibleenso

import org.clulab.reach.PaperReader
import org.clulab.reach.mentions._
import org.clulab.reach.serialization.json._ 
import java.io.File


/** Example demonstrating how to serialize/deserialize 
 * [[org.clulab.reach.mentions.CorefMention]] to/from json 
 */
object ReachJSONExample extends App {

myedibleenso

import org.clulab.processors.fastnlp.FastNLPProcessor
import org.clulab.processors.Document
import org.clulab.struct.Interval
import org.clulab.odin._
import org.clulab.odin.serialization.json.{JSONSerializer => OdinJSONSerializer, _}
import org.clulab.serialization.json._
import java.io.File


/** Example demonstrating how to serialize/deserialize 

myedibleenso

# NE rules

- name: "ner-person"
  label: [Person, PossiblePerson, Entity]
  priority: 1
  type: token
  pattern: |
   [entity="PERSON"]+
   |
   [tag=/^N/]* [tag=/^N/ & outgoing="cop"] [tag=/^N/]*

myedibleenso

#!/bin/bash

# Script for installing tmux on systems where you don't have root access.
# tmux will be installed in $HOME/local/bin.
# It's assumed that wget and a C/C++ compiler are installed.

# exit on error
set -e

TMUX_VERSION=2.2

myedibleenso

# This defines how our entities and events are related to one another semantically
taxonomy:
  - ExpandedEntity:
    - Entity:
      - Nominal:
        - Noun
        - PossiblePerson:
          - Person
        - Organization
        - Location

myedibleenso

#!/usr/bin/env python
# -*- coding: utf-8 -*

try:
    # python 3.X
    from urllib.request import urlopen, urlretrieve
except:
    # python 2.7
    from urllib2 import urlopen
    from urllib import urlretrieve

myedibleenso

"""A simple implementation of a greedy transition-based parser. Released under BSD license."""
from os import path
import os
import sys
from collections import defaultdict
import random
import time
import pickle

SHIFT = 0; RIGHT = 1; LEFT = 2;