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@endolith
endolith / frequency_estimator.py
Last active October 30, 2023 18:08
Frequency estimation methods in Python
from __future__ import division
from numpy.fft import rfft
from numpy import argmax, mean, diff, log, nonzero
from scipy.signal import blackmanharris, correlate
from time import time
import sys
try:
import soundfile as sf
except ImportError:
from scikits.audiolab import flacread
ks.default <- function(rows) seq(2, max(3, rows %/% 4))
many_kmeans <- function(x, ks = ks.default(nrow(x)), ...) {
ldply(seq_along(ks), function(i) {
cl <- kmeans(x, centers = ks[i], ...)
data.frame(obs = seq_len(nrow(x)), i = i, k = ks[i], cluster = cl$cluster)
})
}
all_hclust <- function(x, ks = ks.default(nrow(x)), point.dist = "euclidean", cluster.dist = "ward") {
import logging
class QueueHandler(logging.Handler):
"""
This handler sends events to a queue. Typically, it would be used together
with a multiprocessing Queue to centralise logging to file in one process
(in a multi-process application), so as to avoid file write contention
between processes.
This code is new in Python 3.2, but this class can be copy pasted into
@huyng
huyng / matplotlibrc
Created February 8, 2011 15:50
my default matplotlib settings
### MATPLOTLIBRC FORMAT
# This is a sample matplotlib configuration file - you can find a copy
# of it on your system in
# site-packages/matplotlib/mpl-data/matplotlibrc. If you edit it
# there, please note that it will be overridden in your next install.
# If you want to keep a permanent local copy that will not be
# over-written, place it in HOME/.matplotlib/matplotlibrc (unix/linux
# like systems) and C:\Documents and Settings\yourname\.matplotlib
# (win32 systems).
@wadey
wadey / iterm2.zsh
Last active March 10, 2024 00:32
Change iTerm2 tab color when using SSH
# Usage:
# source iterm2.zsh
# iTerm2 tab color commands
# https://iterm2.com/documentation-escape-codes.html
if [[ -n "$ITERM_SESSION_ID" ]]; then
tab-color() {
echo -ne "\033]6;1;bg;red;brightness;$1\a"
echo -ne "\033]6;1;bg;green;brightness;$2\a"
@sixtenbe
sixtenbe / analytic_wfm.py
Last active May 1, 2024 02:29 — forked from endolith/peakdet.m
Peak detection in Python
#!/usr/bin/python2
# Copyright (C) 2016 Sixten Bergman
# License WTFPL
#
# This program is free software. It comes without any warranty, to the extent
# permitted by applicable law.
# You can redistribute it and/or modify it under the terms of the Do What The
# Fuck You Want To Public License, Version 2, as published by Sam Hocevar. See
import time
import random
from IPython import parallel
# create client & view
rc = parallel.Client()
dv = rc[:]
# scatter 'id', so id=0,1,2 on engines 0,1,2
@schlamar
schlamar / processify.py
Last active April 17, 2024 19:19
processify
import os
import sys
import traceback
from functools import wraps
from multiprocessing import Process, Queue
def processify(func):
'''Decorator to run a function as a process.
Be sure that every argument and the return value
@seberg
seberg / rolling_window.py
Created October 10, 2012 14:38
Multidimensional rolling_window for numpy
def rolling_window(array, window=(0,), asteps=None, wsteps=None, axes=None, toend=True):
"""Create a view of `array` which for every point gives the n-dimensional
neighbourhood of size window. New dimensions are added at the end of
`array` or after the corresponding original dimension.
Parameters
----------
array : array_like
Array to which the rolling window is applied.
window : int or tuple
@iamatypeofwalrus
iamatypeofwalrus / roll_ipython_in_aws.md
Last active January 22, 2024 11:18
Create an iPython HTML Notebook on Amazon's AWS Free Tier from scratch.

What

Roll your own iPython Notebook server with Amazon Web Services (EC2) using their Free Tier.

What are we using? What do you need?

  • An active AWS account. First time sign-ups are eligible for the free tier for a year
  • One Micro Tier EC2 Instance
  • With AWS we will use the stock Ubuntu Server AMI and customize it.
  • Anaconda for Python.
  • Coffee/Beer/Time