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#!/usr/bin/python
# -*- coding: utf-8 -*-
#
# Author: Laurent Besnard
# Institute: IMOS / eMII
# email address: laurent.besnard@utas.edu.au
# Website: http://imos.org.au/  https://github.com/aodn/imos_user_code_library
# Aug 2014; Last revision: 26-August-2013
#
# Copyright 2014 IMOS

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#/bin/bash !
# script to highlight an waht seems to be a bug in the netcdf library
# The script uses the ncdump program to hightlight this, however
# similar behaviour is seen with the netCDF4 python package
# author: laurent besnard,eMII/IMOS laurent.besnard@utas.edu.au  17/12/2015

main() {
    local netcdf_path=imos-srs-prep/sst-test/modified-20121101032000-ABOM-L3S_GHRSST-SSTskin-AVHRR_D-1d_day-v02.0-fv02.0.nc

    local opendap_url=http://rs-data1-mel.csiro.au/thredds/dodsC/$netcdf_path

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#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# Author: Laurent Besnard
# Institute: IMOS / eMII
# email address: laurent.besnard@utas.edu.au

from netCDF4 import Dataset, num2date
from datetime import date
from numpy import meshgrid

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#!/usr/bin/env python
# -*- coding: utf-8 -*-

import gzip
import os
import re

from urllib2 import urlopen
from functools import partial
from wand.image import Image

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Setup ERDDAP on docker

1) create the docker ERDDAP container

We create the docker container on the 8080 port using the config files setup.xml and datasets.xml (available for download in this gist to be copying in ~$HOME/tmp/erddap/directory)

Our docker container is called flamboyant_bassi

erddap_dir_docker=$HOME/tmp/erddap/directory
mkdir -p -v $erddap_dir_docker
sudo docker run -v $erddap_dir_docker:/usr/local/tomcat/content/erddap -d -p 8080:8080 --name=flamboyant_bassi axiom/docker-erddap

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import subprocess
import json
import tempfile

bucket_name = 'imos-data'
s3_prefix_url = 'http://imos-data.s3-website-ap-southeast-2.amazonaws.com/'

prefix = 'IMOS/SRS/Surface-Waves/Wave-Wind-Altimetry-DM00/'
cmd = 'aws s3api list-object-versions --no-sign --bucket {bucket_name} --prefix {prefix}'.format(bucket_name=bucket_name,
                                                                                                 prefix=prefix)

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