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hsm_secret (this is the root key for your onchain funds - can be regenerated from the CLN backup words)
stored on the SSD: /home/bitcoin/.lightning/bitcoin/hsm_secret
lightningd.sqlite3.backup (this is the realtime channals database backup saved to your SDcard by the backup plugin)
find it on the SDcard in /home/bitcoin/. If there are multiple backup files always use the latest one (the backups of the backup are dated and stored when the backup plugin is reinitialized - they can be discarded).
To start the process flash a new SDcard (keep your old SDcard as a backup) and make sure everything is working by starting a new (empty) CLN node and have bitcoind synced.
Upload the backups from your desktop (can use WinSCP on Windows):
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I like public key auth. I feel safer using them instead of a username and password login. But, I might not have my private key with me at a time where I need access.
I started using yubikey with LastPass and since I have it always on my keychain, I decided to find more ways to make use of it.
I wasn't originally aware, but if you pass a private key to ssh and sshd is configured to accept a key, it appears pam isn't used. Your authorized keys are checked and you are logged in. If you don't pass a private key, ssh falls back to the more standard un*x style login found in /etc/pam.d/sshd. This is where we'll add the yubikey pam. I am currently unaware of a way to use both public key auth and yubikey for login.
These steps worked for me on debian squeeze/wheezy.
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