git clone git@github.com:YOUR-USERNAME/YOUR-FORKED-REPO.git
cd into/cloned/fork-repo
git remote add upstream git://github.com/ORIGINAL-DEV-USERNAME/REPO-YOU-FORKED-FROM.git
git fetch upstream
# usage ./lift.sh input input.version output.version "FLAGS" | |
# | |
# e.g: lift.sh Homo_sapiens.GRCh37.61.gtf hg19 hg18 -gff | |
# will map hg19 features to hg18 coordinates. | |
if [ -z $3 ] | |
then | |
echo "usage: lift Homo_sapiens.GRCh37.61.gtf hg19 hg18 -gff" | |
exit 1 | |
fi |
""" | |
Minimal character-level Vanilla RNN model. Written by Andrej Karpathy (@karpathy) | |
BSD License | |
""" | |
import numpy as np | |
# data I/O | |
data = open('input.txt', 'r').read() # should be simple plain text file | |
chars = list(set(data)) | |
data_size, vocab_size = len(data), len(chars) |
This is Bostock's interactive Reingold-Tilford Tree with data representing the rules of a simple sklearn decision tree. Click on nodes to expand or collapse.
For more, see the complete write-up.
""" | |
Copyright 2017 Ronald J. Nowling | |
Licensed under the Apache License, Version 2.0 (the "License"); | |
you may not use this file except in compliance with the License. | |
You may obtain a copy of the License at | |
http://www.apache.org/licenses/LICENSE-2.0 | |
Unless required by applicable law or agreed to in writing, software |
Follow the instructions on Github to Create an Access Token in Github
By default, git credentials are not cached so you need to tell Git if you want to avoid having to provide them each time Github requires you to authenticate. On Mac, Git comes with an “osxkeychain” mode, which caches credentials in the secure keychain that’s attached to your system account.
You can tell Git you want to store credentials in the osxkeychain by running the following:-