bbolker

library(lme4)
library(glmmTMB)
library(glmulti)
set.seed(101)

## updated 3 March 2024; take random effects as formulas so that e.g. `ar1()` terms work

## FIXME: better data so we don't get convergence weirdness etc.?
## A random vector of count data
vy1 <- round(runif(100, min=1,max=20)*round(runif(100,min=1,max=20)))

hadley

ruler <- function(width = getOption("width")) {
  x <- seq_len(width)
  y <- dplyr::case_when(
    x %% 10 == 0 ~ as.character((x %/% 10) %% 10),
    x %% 5 == 0  ~ "+",
    TRUE         ~ "-"
  )
  cat(y, "\n", sep = "")
  cat(x %% 10, "\n", sep = "")
}

gadenbuie

# Animated dplyr joins with gganimate
# * Garrick Aden-Buie
# * garrickadenbuie.com
# * MIT License: https://opensource.org/licenses/MIT

# Note: I used Fira Sans and Fira Mono fonts.
#       Use search and replace to use a different font if Fira is not available.

library(tidyverse)
library(gganimate)

gavinsimpson

## Compare Brooks et al glmmTMB paper with mgcv

## Packages
library("glmmTMB")
library("mgcv")
library("ggplot2")
theme_set(theme_bw())
library("ggstance")

## Salamander

hrbrmstr

This hit #rstats today:

Has anyone made a dumbbell dot plot in #rstats, or better yet exported to @plotlygraphs using the API? https://t.co/rWUSpH1rRl

— Ken Davis (@ken_mke) October 23, 2015

<script async src="//platform.twitter.com/widgets.js" charset="utf-8"></script>

So, I figured it was worth a cpl mins to reproduce.

While the US gov did give the data behind the chart it was all the data and a pain to work with so I used WebPlotDigitizer to transcribe the points and then some data wrangling in R to clean it up and make it work well with ggplot2.

It is possible to make the top "dumbbell" legend in ggplot2 (but not by using a guide) and color the "All Metro A

jennybc

What if a function in a package has no examples? Or is poorly exampled? Wouldn't it be nice to find functioning instances of it "in the wild"?

Via Twitter, Noam Ross taught me a clever way to do such searches on GitHub. Put this into the GitHub search box to see people using the llply() function from plyr:

"llply" user:cran language:R

Or just click here.

sachsmc

Rscript --vanilla run.R 1 > run-1.Rout
Rscript --vanilla run.R 2 > run-2.Rout
Rscript --vanilla run.R 3 > run-3.Rout
Rscript --vanilla run.R 4 > run-4.Rout
Rscript --vanilla run.R 5 > run-5.Rout
Rscript --vanilla run.R 6 > run-6.Rout
Rscript --vanilla run.R 7 > run-7.Rout
Rscript --vanilla run.R 8 > run-8.Rout
Rscript --vanilla run.R 9 > run-9.Rout
Rscript --vanilla run.R 10 > run-10.Rout

benmarwick

;;Record startup timestamp
(defvar Emacs/invokation-time
  (current-time))

(custom-set-variables
 ;; custom-set-variables was added by Custom.
 ;; If you edit it by hand, you could mess it up, so be careful.
 ;; Your init file should contain only one such instance.
 ;; If there is more than one, they won't work right.
 '(custom-enabled-themes (quote (tango-plus)))

dsparks

# Sunlight Foundation style guide: http://design.sunlightlabs.com/projects/Sunlight-StyleGuide-DataViz.pdf
# Ram's original Wes Anderson code: https://github.com/karthik/wesanderson/blob/master/R/colors.R

#' A Wes Anderson palette generator
#'
#' These are a handful of color palettes from Wes Anderson movies. 
#' @param n Number of colors desired. Unfortunately most palettes now only have 4 or 5 colors. But hopefully we'll add more palettes soon. All color schemes are derived from the most excellent Tumblr blog: \href{http://wesandersonpalettes.tumblr.com/}{Wes Anderson Palettes}
#' @param  name Name of desired palette. Choices are: \code{GrandBudapest}, \code{Moonrise1},  \code{Royal1},  \code{Moonrise2}, \code{Cavalcanti},  \code{Royal2}, \code{GrandBudapest2},  \code{Moonrise3},  \code{Chevalier}, \code{BottleRocket}, \code{darjeeling}, \code{darjeeling2} 
#' @param type Set to continuous if you require a gradient of colors similar to how heat map works.
#' @export

casallas

To install

1. Install jags: in the terminal using homebrew brew install jags
2. Install rjags: in R

install.packages("rjags")
library(rjags)

Potential issues